from glob import glob
from pymol import cmd

file_list = glob("*.pdb")

file_list.sort()
for file in file_list:
   cmd.load(file,"mov")


cmd.remove("solvent and (mov)")
cmd.intra_fit("mov")
cmd.show("cartoon"   ,"all")


cmd.mset("1 -%d"%cmd.count_states())
for a in range(1,cmd.count_states()+1): 
    cmd.mdo(a,"dss state=%d"%a)

cmd.do("@/data/users/prueba/CM/peli/colour.pml")
cmd.hide("lines","all")
cmd.set_view("(\
    -0.371701896,   -0.444473922,   -0.815034330,\
    -0.115221672,    0.893233955,   -0.434570670,\
     0.921174347,   -0.067621090,   -0.383231789,\
     0.000000000,    0.000000000, -126.715179443,\
     0.109295845,   -0.054450989,   -0.114889145,\
    85.205093384,  168.225311279,  -20.000000000 )")
#cmd.set_view("( \
#    -0.371701896,   -0.444473922,   -0.815034330,\
#    -0.115221672,    0.893233955,   -0.434570670,\
#     0.921174347,   -0.067621090,   -0.383231789,\
#     0.000000000,    0.000000000, -135.702407837,\
#     0.109295845,   -0.054450989,   -0.114889145,\
#   104.515274048,  166.889511108,  -20.000000000 )")


cmd.do("set ray_trace_frames=1")
cmd.do("set cache_frames=0")
cmd.do("mclear")
cmd.do("mpng mov")